Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Lrp6O88572 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrp6O88572 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Lrp6O88572 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC22.22■■□□□ 1.15
Lrp6O88572 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrp6O88572 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC22.22■■□□□ 1.15
Lrp6O88572 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrp6O88572 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Lrp6O88572 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.21■■□□□ 1.15
Lrp6O88572 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Gm14701-201ENSMUST00000117156 348 ntBASIC22.21■■□□□ 1.15
Lrp6O88572 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC22.21■■□□□ 1.15
Lrp6O88572 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Lrp6O88572 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrp6O88572 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC22.2■■□□□ 1.15
Lrp6O88572 Gm44450-201ENSMUST00000199528 114 ntBASIC22.2■■□□□ 1.15
Lrp6O88572 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrp6O88572 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrp6O88572 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.2■■□□□ 1.14
Lrp6O88572 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Lrp6O88572 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrp6O88572 Gm44872-201ENSMUST00000207864 420 ntBASIC22.2■■□□□ 1.14
Lrp6O88572 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Lrp6O88572 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrp6O88572 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Lrp6O88572 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC22.19■■□□□ 1.14
Lrp6O88572 Gm4913-201ENSMUST00000117075 1290 ntBASIC22.19■■□□□ 1.14
Lrp6O88572 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC22.19■■□□□ 1.14
Lrp6O88572 Mir3113-201ENSMUST00000175478 76 ntBASIC22.19■■□□□ 1.14
Lrp6O88572 Mir6956-201ENSMUST00000183598 62 ntBASIC22.19■■□□□ 1.14
Lrp6O88572 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC22.19■■□□□ 1.14
Lrp6O88572 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC22.19■■□□□ 1.14
Lrp6O88572 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrp6O88572 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Lrp6O88572 Gm6184-201ENSMUST00000120403 1261 ntBASIC22.18■■□□□ 1.14
Lrp6O88572 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrp6O88572 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC22.17■■□□□ 1.14
Lrp6O88572 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Lrp6O88572 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.17■■□□□ 1.14
Lrp6O88572 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC22.17■■□□□ 1.14
Lrp6O88572 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC22.17■■□□□ 1.14
Lrp6O88572 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrp6O88572 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC22.16■■□□□ 1.14
Lrp6O88572 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrp6O88572 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.15■■□□□ 1.14
Lrp6O88572 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrp6O88572 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.15■■□□□ 1.14
Lrp6O88572 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrp6O88572 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrp6O88572 Gm18421-201ENSMUST00000204122 625 ntBASIC22.15■■□□□ 1.14
Lrp6O88572 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC22.15■■□□□ 1.14
Lrp6O88572 Gm7506-201ENSMUST00000207758 815 ntBASIC22.15■■□□□ 1.14
Lrp6O88572 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC22.15■■□□□ 1.14
Lrp6O88572 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrp6O88572 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrp6O88572 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lrp6O88572 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.14
Lrp6O88572 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC22.14■■□□□ 1.14
Lrp6O88572 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC22.14■■□□□ 1.14
Lrp6O88572 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Lrp6O88572 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lrp6O88572 Gm15500-202ENSMUST00000071641 1019 ntBASIC22.14■■□□□ 1.14
Lrp6O88572 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lrp6O88572 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms