Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Per1O35973 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Per1O35973 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Per1O35973 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Per1O35973 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.57■□□□□ 0.56
Per1O35973 Gm25016-201ENSMUST00000158399 131 ntBASIC18.57■□□□□ 0.56
Per1O35973 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.57■□□□□ 0.56
Per1O35973 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Per1O35973 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.57■□□□□ 0.56
Per1O35973 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Per1O35973 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Per1O35973 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.56■□□□□ 0.56
Per1O35973 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Per1O35973 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Per1O35973 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Per1O35973 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.55■□□□□ 0.56
Per1O35973 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Per1O35973 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.55■□□□□ 0.56
Per1O35973 Gm6345-202ENSMUST00000180900 204 ntBASIC18.55■□□□□ 0.56
Per1O35973 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.55■□□□□ 0.56
Per1O35973 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.55■□□□□ 0.56
Per1O35973 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Per1O35973 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Per1O35973 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.55■□□□□ 0.56
Per1O35973 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.55■□□□□ 0.56
Per1O35973 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Per1O35973 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Per1O35973 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.54■□□□□ 0.56
Per1O35973 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Per1O35973 Gm18115-201ENSMUST00000221209 621 ntBASIC18.54■□□□□ 0.56
Per1O35973 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Per1O35973 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Per1O35973 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.54■□□□□ 0.56
Per1O35973 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.54■□□□□ 0.56
Per1O35973 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Per1O35973 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Per1O35973 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.53■□□□□ 0.56
Per1O35973 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Per1O35973 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Per1O35973 Phf7-203ENSMUST00000226565 1971 ntBASIC18.53■□□□□ 0.56
Per1O35973 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Per1O35973 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms