Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cx3cl1O35188 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Gm7638-201ENSMUST00000121348 967 ntBASIC16.06■□□□□ 0.16
Cx3cl1O35188 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Gm37025-201ENSMUST00000195159 829 ntBASIC16.06■□□□□ 0.16
Cx3cl1O35188 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cx3cl1O35188 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cx3cl1O35188 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Gm27463-201ENSMUST00000183569 57 ntBASIC16.04■□□□□ 0.16
Cx3cl1O35188 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.04■□□□□ 0.16
Cx3cl1O35188 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cx3cl1O35188 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.03■□□□□ 0.16
Cx3cl1O35188 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.03■□□□□ 0.16
Cx3cl1O35188 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.03■□□□□ 0.16
Cx3cl1O35188 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cx3cl1O35188 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.02■□□□□ 0.16
Cx3cl1O35188 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cx3cl1O35188 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms