Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gfra3O35118 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra3O35118 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.79□□□□□ -0.04
Gfra3O35118 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.79□□□□□ -0.04
Gfra3O35118 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.79□□□□□ -0.04
Gfra3O35118 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.79□□□□□ -0.04
Gfra3O35118 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Gfra3O35118 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Gfra3O35118 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra3O35118 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.78□□□□□ -0.04
Gfra3O35118 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Gfra3O35118 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.78□□□□□ -0.04
Gfra3O35118 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Gfra3O35118 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gfra3O35118 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Gm16061-201ENSMUST00000122167 857 ntBASIC14.78□□□□□ -0.04
Gfra3O35118 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.78□□□□□ -0.04
Gfra3O35118 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gfra3O35118 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Gfra3O35118 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gfra3O35118 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Gfra3O35118 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra3O35118 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra3O35118 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra3O35118 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Gfra3O35118 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra3O35118 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Gfra3O35118 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Gfra3O35118 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra3O35118 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra3O35118 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gfra3O35118 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
Gfra3O35118 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Gm7370-201ENSMUST00000219471 767 ntBASIC14.77□□□□□ -0.05
Gfra3O35118 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.77□□□□□ -0.05
Gfra3O35118 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gfra3O35118 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gfra3O35118 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.77□□□□□ -0.05
Gfra3O35118 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.77□□□□□ -0.05
Gfra3O35118 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gfra3O35118 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Gfra3O35118 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Gfra3O35118 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Gfra3O35118 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.76□□□□□ -0.05
Gfra3O35118 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.76□□□□□ -0.05
Gfra3O35118 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Gfra3O35118 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
Gfra3O35118 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gfra3O35118 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gfra3O35118 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gfra3O35118 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Gfra3O35118 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.75□□□□□ -0.05
Gfra3O35118 Gm18032-201ENSMUST00000222541 538 ntBASIC14.75□□□□□ -0.05
Gfra3O35118 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Gfra3O35118 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms