Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Polr2jO08740 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.43■□□□□ 0.22
Polr2jO08740 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Polr2jO08740 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Polr2jO08740 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.42■□□□□ 0.22
Polr2jO08740 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Polr2jO08740 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Gm15375-201ENSMUST00000119510 849 ntBASIC16.42■□□□□ 0.22
Polr2jO08740 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.42■□□□□ 0.22
Polr2jO08740 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Gm4968-201ENSMUST00000071458 858 ntBASIC16.42■□□□□ 0.22
Polr2jO08740 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Polr2jO08740 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.42■□□□□ 0.22
Polr2jO08740 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Polr2jO08740 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Polr2jO08740 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.41■□□□□ 0.22
Polr2jO08740 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Gm2559-201ENSMUST00000201323 363 ntBASIC16.41■□□□□ 0.22
Polr2jO08740 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.41■□□□□ 0.22
Polr2jO08740 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Polr2jO08740 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Polr2jO08740 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Polr2jO08740 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.41■□□□□ 0.22
Polr2jO08740 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Polr2jO08740 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.4■□□□□ 0.22
Polr2jO08740 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Polr2jO08740 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.4■□□□□ 0.22
Polr2jO08740 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.4■□□□□ 0.22
Polr2jO08740 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.4■□□□□ 0.22
Polr2jO08740 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Polr2jO08740 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Polr2jO08740 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Polr2jO08740 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.39■□□□□ 0.21
Polr2jO08740 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.39■□□□□ 0.21
Polr2jO08740 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 Gm5408-201ENSMUST00000197998 747 ntBASIC16.39■□□□□ 0.21
Polr2jO08740 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.39■□□□□ 0.21
Polr2jO08740 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.39■□□□□ 0.21
Polr2jO08740 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Polr2jO08740 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.39■□□□□ 0.21
Polr2jO08740 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Polr2jO08740 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Polr2jO08740 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Polr2jO08740 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Polr2jO08740 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Polr2jO08740 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Polr2jO08740 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Polr2jO08740 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Polr2jO08740 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms