Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AlyrefO08583 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
AlyrefO08583 Gm7638-201ENSMUST00000121348 967 ntBASIC17.25■□□□□ 0.35
AlyrefO08583 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.25■□□□□ 0.35
AlyrefO08583 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.25■□□□□ 0.35
AlyrefO08583 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.25■□□□□ 0.35
AlyrefO08583 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.25■□□□□ 0.35
AlyrefO08583 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
AlyrefO08583 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
AlyrefO08583 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AlyrefO08583 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AlyrefO08583 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Gm15165-201ENSMUST00000118140 502 ntBASIC17.24■□□□□ 0.35
AlyrefO08583 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
AlyrefO08583 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
AlyrefO08583 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AlyrefO08583 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
AlyrefO08583 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.23■□□□□ 0.35
AlyrefO08583 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
AlyrefO08583 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
AlyrefO08583 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.23■□□□□ 0.35
AlyrefO08583 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.23■□□□□ 0.35
AlyrefO08583 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
AlyrefO08583 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.23■□□□□ 0.35
AlyrefO08583 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.23■□□□□ 0.35
AlyrefO08583 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.23■□□□□ 0.35
AlyrefO08583 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.23■□□□□ 0.35
AlyrefO08583 Gm6376-201ENSMUST00000209407 580 ntBASIC17.23■□□□□ 0.35
AlyrefO08583 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.23■□□□□ 0.35
AlyrefO08583 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
AlyrefO08583 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AlyrefO08583 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AlyrefO08583 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
AlyrefO08583 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AlyrefO08583 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.22■□□□□ 0.35
AlyrefO08583 Gm12350-201ENSMUST00000121208 462 ntBASIC17.22■□□□□ 0.35
AlyrefO08583 Gm7862-201ENSMUST00000121461 292 ntBASIC17.22■□□□□ 0.35
AlyrefO08583 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AlyrefO08583 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AlyrefO08583 Fst-202ENSMUST00000223640 2612 ntBASIC17.22■□□□□ 0.35
AlyrefO08583 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
AlyrefO08583 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AlyrefO08583 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AlyrefO08583 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AlyrefO08583 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AlyrefO08583 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AlyrefO08583 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AlyrefO08583 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.21■□□□□ 0.35
AlyrefO08583 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AlyrefO08583 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.21■□□□□ 0.35
AlyrefO08583 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms