Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
B020004C17RikJ3QP07 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
B020004C17RikJ3QP07 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
B020004C17RikJ3QP07 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
B020004C17RikJ3QP07 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
B020004C17RikJ3QP07 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
B020004C17RikJ3QP07 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
B020004C17RikJ3QP07 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
B020004C17RikJ3QP07 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
B020004C17RikJ3QP07 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
B020004C17RikJ3QP07 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
B020004C17RikJ3QP07 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms