Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim34bJ3QNR8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Gm27741-201ENSMUST00000185060 237 ntBASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Gm17807-201ENSMUST00000186869 298 ntBASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim34bJ3QNR8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim34bJ3QNR8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim34bJ3QNR8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim34bJ3QNR8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Trim34bJ3QNR8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim34bJ3QNR8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim34bJ3QNR8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Gm45328-201ENSMUST00000210942 917 ntBASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim34bJ3QNR8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim34bJ3QNR8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim34bJ3QNR8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms