Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NpcdF8VQB8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
NpcdF8VQB8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NpcdF8VQB8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NpcdF8VQB8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NpcdF8VQB8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NpcdF8VQB8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.51■□□□□ 0.87
NpcdF8VQB8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NpcdF8VQB8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
NpcdF8VQB8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Gm11594-201ENSMUST00000122313 162 ntBASIC20.5■□□□□ 0.87
NpcdF8VQB8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NpcdF8VQB8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.5■□□□□ 0.87
NpcdF8VQB8 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.5■□□□□ 0.87
NpcdF8VQB8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.5■□□□□ 0.87
NpcdF8VQB8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.49■□□□□ 0.87
NpcdF8VQB8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NpcdF8VQB8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.48■□□□□ 0.87
NpcdF8VQB8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NpcdF8VQB8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NpcdF8VQB8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Gm7862-201ENSMUST00000121461 292 ntBASIC20.47■□□□□ 0.87
NpcdF8VQB8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.47■□□□□ 0.87
NpcdF8VQB8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.47■□□□□ 0.87
NpcdF8VQB8 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.47■□□□□ 0.87
NpcdF8VQB8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NpcdF8VQB8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NpcdF8VQB8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.46■□□□□ 0.87
NpcdF8VQB8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.46■□□□□ 0.87
NpcdF8VQB8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.46■□□□□ 0.87
NpcdF8VQB8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NpcdF8VQB8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms