Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh1F7BJK1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Mir5133-201ENSMUST00000174955 77 ntBASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Mir6349-201ENSMUST00000184059 97 ntBASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh1F7BJK1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Gm13148-201ENSMUST00000118892 745 ntBASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh1F7BJK1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Gm12933-201ENSMUST00000120203 872 ntBASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Rab3c-203ENSMUST00000224180 967 ntBASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh1F7BJK1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms