Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.28■□□□□ 0.04
Shank1D3YZU1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.27■□□□□ 0.04
Shank1D3YZU1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shank1D3YZU1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.27■□□□□ 0.03
Shank1D3YZU1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shank1D3YZU1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.26■□□□□ 0.03
Shank1D3YZU1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shank1D3YZU1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Gm12895-201ENSMUST00000122214 226 ntBASIC15.25■□□□□ 0.03
Shank1D3YZU1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.25■□□□□ 0.03
Shank1D3YZU1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shank1D3YZU1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.24■□□□□ 0.03
Shank1D3YZU1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.24■□□□□ 0.03
Shank1D3YZU1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shank1D3YZU1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms