Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim30cD3YVI9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim30cD3YVI9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim30cD3YVI9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim30cD3YVI9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim30cD3YVI9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.64■□□□□ 0.58
Trim30cD3YVI9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Trim30cD3YVI9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim30cD3YVI9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms