Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h2abC0HKE1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h2abC0HKE1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h2abC0HKE1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hist1h2abC0HKE1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Gm18666-201ENSMUST00000190039 958 ntBASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hist1h2abC0HKE1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Gm27275-201ENSMUST00000184318 272 ntBASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h2abC0HKE1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h2abC0HKE1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h2abC0HKE1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms