Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Gm27275-201ENSMUST00000184318 272 ntBASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Gm37292-201ENSMUST00000192062 758 ntBASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Gm4974-201ENSMUST00000209974 875 ntBASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc112A0AUP1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc112A0AUP1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc112A0AUP1 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.52■□□□□ 0.71
Ccdc112A0AUP1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc112A0AUP1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc112A0AUP1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc112A0AUP1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc112A0AUP1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc112A0AUP1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms