Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Gm9103-201ENSMUST00000119371 405 ntBASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Cfap99A0A140LIX9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap99A0A140LIX9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Gm13474-201ENSMUST00000122466 815 ntBASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Ank2-226ENSMUST00000189368 339 ntBASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap99A0A140LIX9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap99A0A140LIX9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap99A0A140LIX9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Gm29791-202ENSMUST00000207888 369 ntBASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap99A0A140LIX9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cfap99A0A140LIX9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cfap99A0A140LIX9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.39■□□□□ 0.85
Cfap99A0A140LIX9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms