Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav23A0A0G2JG17 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Gm10418-201ENSMUST00000100943 576 ntBASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav23A0A0G2JG17 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Gm11643-201ENSMUST00000119578 864 ntBASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav23A0A0G2JG17 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav23A0A0G2JG17 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Gm13401-201ENSMUST00000117074 291 ntBASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav23A0A0G2JG17 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav23A0A0G2JG17 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms