Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 AC133083.1-201ENSMUST00000221736 2209 ntBASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm16011-201ENSMUST00000121567 2662 ntBASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igkv8-27A0A0G2JF28 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm27801-201ENSMUST00000184174 223 ntBASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 AC165080.2-201ENSMUST00000217491 1530 ntBASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC10.77□□□□□ -0.69
Igkv8-27A0A0G2JF28 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Igkv8-27A0A0G2JF28 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms