Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Gm10033-202ENSMUST00000211874 928 ntBASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Gm6365-201ENSMUST00000054711 744 ntBASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Flg-201ENSMUST00000050758 1488 ntBASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Gm13216-201ENSMUST00000117145 591 ntBASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav19A0A0B4J1K4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav19A0A0B4J1K4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Gm7291-201ENSMUST00000199147 382 ntBASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms