Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbc1A0A0A6YWV4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm12085-201ENSMUST00000119263 940 ntBASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbc1A0A0A6YWV4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm24841-201ENSMUST00000158676 357 ntBASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm38027-201ENSMUST00000192315 235 ntBASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.71■□□□□ 0.11
Trbc1A0A0A6YWV4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbc1A0A0A6YWV4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbc1A0A0A6YWV4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbc1A0A0A6YWV4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trbc1A0A0A6YWV4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
Trbc1A0A0A6YWV4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbc1A0A0A6YWV4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbc1A0A0A6YWV4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm30025-201ENSMUST00000218555 728 ntBASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms