Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav18A0A075B656 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav18A0A075B656 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.03□□□□□ -0.16
Trav18A0A075B656 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.03□□□□□ -0.16
Trav18A0A075B656 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav18A0A075B656 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav18A0A075B656 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav18A0A075B656 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Gm27275-201ENSMUST00000184318 272 ntBASIC14.02□□□□□ -0.17
Trav18A0A075B656 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav18A0A075B656 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav18A0A075B656 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.01□□□□□ -0.17
Trav18A0A075B656 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.01□□□□□ -0.17
Trav18A0A075B656 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav18A0A075B656 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav18A0A075B656 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav18A0A075B656 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav18A0A075B656 Gm13158-201ENSMUST00000122007 736 ntBASIC14□□□□□ -0.17
Trav18A0A075B656 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14□□□□□ -0.17
Trav18A0A075B656 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav18A0A075B656 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Gm42545-201ENSMUST00000202755 922 ntBASIC13.99□□□□□ -0.17
Trav18A0A075B656 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.99□□□□□ -0.17
Trav18A0A075B656 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms