Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.54□□□□□ -0.56
Trav13-2A0A075B649 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav13-2A0A075B649 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-2A0A075B649 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.52□□□□□ -0.56
Trav13-2A0A075B649 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-2A0A075B649 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-2A0A075B649 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-2A0A075B649 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-2A0A075B649 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-2A0A075B649 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms