Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8-1A0A075B641 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8-1A0A075B641 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav8-1A0A075B641 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav8-1A0A075B641 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Idnk-204ENSMUST00000226010 1898 ntBASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav8-1A0A075B641 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms