Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7n-4A0A075B620 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7n-4A0A075B620 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav7n-4A0A075B620 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Gm29791-202ENSMUST00000207888 369 ntBASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7n-4A0A075B620 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7n-4A0A075B620 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7n-4A0A075B620 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7n-4A0A075B620 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms