Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.92□□□□□ -0.5
Trav4n-4A0A075B615 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Gm7417-201ENSMUST00000192950 473 ntBASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4n-4A0A075B615 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Gm27801-201ENSMUST00000184174 223 ntBASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4n-4A0A075B615 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.9□□□□□ -0.51
Trav4n-4A0A075B615 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav4n-4A0A075B615 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav4n-4A0A075B615 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms