Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm22115-201ENSMUST00000103976 133 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm23923-201ENSMUST00000104108 133 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Mir294-201ENSMUST00000104710 84 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm25923-201ENSMUST00000158312 138 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm24086-201ENSMUST00000175171 98 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm27445-201ENSMUST00000184484 72 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm37791-201ENSMUST00000195081 286 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm43324-201ENSMUST00000197482 289 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm43206-201ENSMUST00000197990 114 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm43587-201ENSMUST00000199590 204 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm43264-201ENSMUST00000202284 325 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm5175-202ENSMUST00000219699 529 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.86□□□□□ -1.63
Col9a1Q05722 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col9a1Q05722 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col9a1Q05722 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Col9a1Q05722 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col9a1Q05722 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col9a1Q05722 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col9a1Q05722 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm6025-201ENSMUST00000121517 201 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm22708-201ENSMUST00000158987 103 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm20438-201ENSMUST00000174441 329 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm25999-201ENSMUST00000175398 133 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm25464-201ENSMUST00000175481 107 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Mir6516-201ENSMUST00000196236 110 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Gm43676-201ENSMUST00000197532 540 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Snord21-201ENSMUST00000082519 94 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.85□□□□□ -1.63
Col9a1Q05722 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col9a1Q05722 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col9a1Q05722 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm24283-201ENSMUST00000104233 107 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm14536-201ENSMUST00000118324 138 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm14560-201ENSMUST00000118672 375 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm15027-201ENSMUST00000120922 138 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm12443-201ENSMUST00000122308 323 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm8840-201ENSMUST00000122454 386 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm22850-201ENSMUST00000157714 82 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm26045-201ENSMUST00000157862 97 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm25977-201ENSMUST00000158697 85 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Mir6344-201ENSMUST00000183462 104 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.84□□□□□ -1.63
Col9a1Q05722 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Gm25789-201ENSMUST00000083294 76 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Mir383-201ENSMUST00000083523 70 ntBASIC4.84□□□□□ -1.63
Col9a1Q05722 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col9a1Q05722 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col9a1Q05722 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col9a1Q05722 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col9a1Q05722 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col9a1Q05722 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col9a1Q05722 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.84□□□□□ -1.64
Col9a1Q05722 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col9a1Q05722 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Col9a1Q05722 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Col9a1Q05722 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm14020-201ENSMUST00000118165 662 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms