Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Gjb1P28230 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Gjb1P28230 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Gjb1P28230 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Gjb1P28230 Gm24835-201ENSMUST00000116777 111 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm13761-201ENSMUST00000117238 807 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm13167-201ENSMUST00000118554 578 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.63□□□□□ -1.83
Gjb1P28230 Gm22216-201ENSMUST00000157557 114 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm22098-201ENSMUST00000157930 85 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm22257-201ENSMUST00000158687 301 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm22668-201ENSMUST00000158716 260 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Mir6338-201ENSMUST00000183389 109 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm27893-201ENSMUST00000184408 194 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm29352-201ENSMUST00000188054 544 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.63□□□□□ -1.83
Gjb1P28230 Gm8242-202ENSMUST00000193056 475 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.63□□□□□ -1.83
Gjb1P28230 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.63□□□□□ -1.83
Gjb1P28230 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Gjb1P28230 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Gjb1P28230 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Gjb1P28230 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Gjb1P28230 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Gjb1P28230 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Gjb1P28230 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm13409-201ENSMUST00000122072 546 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.62□□□□□ -1.83
Gjb1P28230 Gm16218-201ENSMUST00000155424 388 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm26101-201ENSMUST00000157246 105 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm22187-201ENSMUST00000157819 129 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm24191-201ENSMUST00000157977 122 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm3027-201ENSMUST00000167579 451 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21842-201ENSMUST00000177552 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21626-201ENSMUST00000177791 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21562-201ENSMUST00000177888 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21539-201ENSMUST00000177925 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21599-201ENSMUST00000178249 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21914-201ENSMUST00000178452 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21723-201ENSMUST00000178692 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21916-201ENSMUST00000178771 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21801-201ENSMUST00000178865 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21633-201ENSMUST00000178941 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm24862-201ENSMUST00000179103 79 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm23310-201ENSMUST00000179105 79 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm25461-201ENSMUST00000179293 79 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm26297-201ENSMUST00000179464 132 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21821-201ENSMUST00000179646 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21588-201ENSMUST00000180074 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21780-201ENSMUST00000180128 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21572-201ENSMUST00000180134 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm21529-201ENSMUST00000180175 498 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Mir6383-201ENSMUST00000184545 116 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm29370-202ENSMUST00000187476 499 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm28920-201ENSMUST00000189957 699 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.62□□□□□ -1.83
Gjb1P28230 Gm28155-201ENSMUST00000191066 151 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Gjb1P28230 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.62□□□□□ -1.83
Gjb1P28230 Gm44161-201ENSMUST00000203532 253 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Gm35405-201ENSMUST00000218754 400 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Snord68-201ENSMUST00000082516 86 ntBASIC3.62□□□□□ -1.83
Gjb1P28230 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Gjb1P28230 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Gjb1P28230 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Gjb1P28230 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Gjb1P28230 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm13711-201ENSMUST00000119708 453 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm23000-201ENSMUST00000157083 139 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm23234-201ENSMUST00000157304 134 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm24504-201ENSMUST00000157679 100 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm24819-201ENSMUST00000175094 166 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Mir5127-201ENSMUST00000175295 71 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm17522-201ENSMUST00000178144 498 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Gjb1P28230 Gm24264-201ENSMUST00000179835 94 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm23003-201ENSMUST00000179948 107 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.61□□□□□ -1.83
Gjb1P28230 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Gm19252-201ENSMUST00000204705 305 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.61□□□□□ -1.83
Gjb1P28230 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms