Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX4O60224 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSX4O60224 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.1□□□□□ -1.43
SSX4O60224 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.1□□□□□ -1.43
SSX4O60224 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 AC063955.1-201ENST00000462872 685 ntBASIC6.1□□□□□ -1.43
SSX4O60224 AP002371.1-201ENST00000463604 433 ntBASIC6.1□□□□□ -1.43
SSX4O60224 RPL17P2-201ENST00000491913 451 ntBASIC6.1□□□□□ -1.43
SSX4O60224 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.1□□□□□ -1.43
SSX4O60224 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.1□□□□□ -1.43
SSX4O60224 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX4O60224 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX4O60224 OR4A21P-201ENST00000532759 944 ntBASIC6.1□□□□□ -1.43
SSX4O60224 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX4O60224 EIF1AXP2-201ENST00000555940 413 ntBASIC6.1□□□□□ -1.43
SSX4O60224 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.1□□□□□ -1.43
SSX4O60224 AC090286.3-201ENST00000573133 187 ntBASIC6.1□□□□□ -1.43
SSX4O60224 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX4O60224 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX4O60224 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX4O60224 GTF2IP6-201ENST00000583143 541 ntBASIC6.1□□□□□ -1.43
SSX4O60224 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX4O60224 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX4O60224 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX4O60224 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX4O60224 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSX4O60224 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SSX4O60224 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 RN7SKP55-201ENST00000364888 307 ntBASIC6.09□□□□□ -1.43
SSX4O60224 OR2W4P-201ENST00000406496 926 ntBASIC6.09□□□□□ -1.43
SSX4O60224 RN7SKP271-201ENST00000410528 320 ntBASIC6.09□□□□□ -1.43
SSX4O60224 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX4O60224 AC117434.1-201ENST00000419971 836 ntBASIC6.09□□□□□ -1.43
SSX4O60224 FTLP17-201ENST00000432567 525 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AL022324.2-201ENST00000434827 780 ntBASIC6.09□□□□□ -1.43
SSX4O60224 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX4O60224 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX4O60224 AC009518.3-201ENST00000438972 253 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AC091982.1-202ENST00000473923 343 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX4O60224 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX4O60224 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX4O60224 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX4O60224 AL135978.1-201ENST00000553618 1266 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AC135626.1-201ENST00000556983 435 ntBASIC6.09□□□□□ -1.43
SSX4O60224 OR4N3P-201ENST00000559395 818 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 RN7SL667P-201ENST00000582817 298 ntBASIC6.09□□□□□ -1.43
SSX4O60224 RPS27AP19-201ENST00000597285 458 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX4O60224 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AC135068.4-201ENST00000622949 925 ntBASIC6.09□□□□□ -1.43
SSX4O60224 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 AL451064.2-201ENST00000623514 1654 ntBASIC6.09□□□□□ -1.43
SSX4O60224 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 AC068769.1-201ENST00000474767 2426 ntBASIC6.09□□□□□ -1.43
SSX4O60224 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX4O60224 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX4O60224 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX4O60224 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.09□□□□□ -1.44
SSX4O60224 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.09□□□□□ -1.44
SSX4O60224 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.09□□□□□ -1.44
SSX4O60224 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSX4O60224 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 TRIM53CP-201ENST00000531490 1354 ntBASIC6.08□□□□□ -1.44
SSX4O60224 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms