Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC008171.1-201ENST00000395058 200 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC002069.1-201ENST00000429649 1159 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AL138899.2-201ENST00000439139 499 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 BZW1P1-201ENST00000454901 1240 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC106800.2-201ENST00000514009 1103 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 SNRPCP6-201ENST00000528310 210 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 PRELID3BP3-201ENST00000584963 545 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AL034374.2-201ENST00000605281 548 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC068726.1-201ENST00000610993 341 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AC131009.3-201ENST00000621809 287 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ZNF806-201ENST00000438300 1774 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 AL022323.4-201ENST00000623980 13120 ntBASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 CAP1P2-201ENST00000417455 1409 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AL451064.2-201ENST00000623514 1654 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC022507.1-201ENST00000548349 1505 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 RN7SKP187-201ENST00000365536 330 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 UBBP1-201ENST00000392399 473 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AL359885.1-201ENST00000415786 903 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 GAPDHP57-201ENST00000424400 585 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 EEF1B2P3-201ENST00000447718 678 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 RPL23AP28-201ENST00000448062 470 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 MEF2AP1-201ENST00000454867 863 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 RPL5P12-201ENST00000477071 851 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC021220.1-201ENST00000507445 630 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC011352.2-201ENST00000514574 1016 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC007068.2-201ENST00000543168 395 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 RPL29P33-201ENST00000587474 316 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC012368.3-201ENST00000604190 219 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AL359091.2-201ENST00000609303 556 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AL132796.3-201ENST00000624703 900 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 MAPK10-383ENST00000642032 3390 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AL669831.5-218ENST00000591702 1873 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 MAPK10-365ENST00000641902 3825 ntBASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA1Q9UND3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms