Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 MIR138-2-201ENST00000384916 84 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC006511.2-201ENST00000388966 660 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 ZNF37CP-201ENST00000406795 241 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 RNA5SP280-201ENST00000411230 115 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC131233.1-201ENST00000479200 955 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VMP1Q96GC9 RPL10P7-201ENST00000495649 625 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 AL135933.1-201ENST00000498657 802 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC114940.1-201ENST00000512162 1265 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 DCAF13P2-201ENST00000514188 555 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 MIR4800-201ENST00000537353 80 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC025423.2-201ENST00000537570 439 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 LINC00556-201ENST00000569603 412 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC245407.2-201ENST00000614199 451 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 AC006453.3-201ENST00000635891 377 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VMP1Q96GC9 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VMP1Q96GC9 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 CLCA3P-203ENST00000490028 2781 ntBASIC6.59□□□□□ -1.35
VMP1Q96GC9 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VMP1Q96GC9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
VMP1Q96GC9 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.59□□□□□ -1.36
VMP1Q96GC9 Z83820.1-201ENST00000456978 1499 ntBASIC6.59□□□□□ -1.36
VMP1Q96GC9 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.59□□□□□ -1.36
VMP1Q96GC9 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.59□□□□□ -1.36
VMP1Q96GC9 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 MRPL32P1-201ENST00000406301 247 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 VN1R3-201ENST00000418822 919 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 SNRPEP5-201ENST00000425442 278 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 MGAT2P2-201ENST00000427194 797 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 PUDPP2-201ENST00000431423 643 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 MTCO3P17-201ENST00000443775 513 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 ST13P21-201ENST00000453250 1098 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AGKP1-201ENST00000455254 1263 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 TREML3P-201ENST00000457327 501 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 GAPDHP53-201ENST00000458397 924 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 RPS16P9-201ENST00000477220 427 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 RN7SL518P-201ENST00000491887 280 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 FXNP1-201ENST00000555153 337 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC026458.1-201ENST00000564330 438 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC115989.2-201ENST00000578640 563 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 VN1R81P-201ENST00000602085 372 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC063962.1-201ENST00000608199 521 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 RN7SL126P-201ENST00000616400 299 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC127071.1-201ENST00000624997 712 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 BIN2P1-201ENST00000504996 1530 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AL353763.1-201ENST00000624467 1628 ntBASIC6.58□□□□□ -1.36
VMP1Q96GC9 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
VMP1Q96GC9 AC005261.6-201ENST00000623072 1387 ntBASIC6.57□□□□□ -1.36
VMP1Q96GC9 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms