Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.6□□□□□ -1.51
CDX1P47902 PABPC1P10-201ENST00000464731 381 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.6□□□□□ -1.51
CDX1P47902 SEPT7P6-201ENST00000469999 1143 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AGGF1P3-201ENST00000493675 1213 ntBASIC5.6□□□□□ -1.51
CDX1P47902 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.6□□□□□ -1.51
CDX1P47902 AC105391.1-201ENST00000503155 1045 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC008967.1-201ENST00000504843 163 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.6□□□□□ -1.51
CDX1P47902 SCARNA18.2-201ENST00000516882 84 ntBASIC5.6□□□□□ -1.51
CDX1P47902 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.6□□□□□ -1.51
CDX1P47902 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CDX1P47902 AC090971.3-201ENST00000557871 1041 ntBASIC5.6□□□□□ -1.51
CDX1P47902 NDUFA3P4-201ENST00000560814 250 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC126323.4-201ENST00000566935 234 ntBASIC5.6□□□□□ -1.51
CDX1P47902 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDX1P47902 MIR5010-201ENST00000582846 120 ntBASIC5.6□□□□□ -1.51
CDX1P47902 MIR3159-201ENST00000584572 74 ntBASIC5.6□□□□□ -1.51
CDX1P47902 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.6□□□□□ -1.51
CDX1P47902 AC011497.2-201ENST00000600255 639 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC092960.1-201ENST00000604762 351 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC020658.4-201ENST00000613987 684 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC116165.3-201ENST00000614524 400 ntBASIC5.6□□□□□ -1.51
CDX1P47902 AC009283.1-201ENST00000615852 645 ntBASIC5.6□□□□□ -1.51
CDX1P47902 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.6□□□□□ -1.51
CDX1P47902 AC016542.3-201ENST00000623520 619 ntBASIC5.6□□□□□ -1.51
CDX1P47902 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.6□□□□□ -1.51
CDX1P47902 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.6□□□□□ -1.51
CDX1P47902 MIR665-201ENST00000635949 72 ntBASIC5.6□□□□□ -1.51
CDX1P47902 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDX1P47902 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.6□□□□□ -1.51
CDX1P47902 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.6□□□□□ -1.51
CDX1P47902 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDX1P47902 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDX1P47902 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 MTHFD2P5-201ENST00000320415 844 ntBASIC5.59□□□□□ -1.51
CDX1P47902 RNU6-1331P-201ENST00000363658 106 ntBASIC5.59□□□□□ -1.51
CDX1P47902 RNA5SP114-201ENST00000363780 113 ntBASIC5.59□□□□□ -1.51
CDX1P47902 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDX1P47902 MIR152-201ENST00000385212 87 ntBASIC5.59□□□□□ -1.51
CDX1P47902 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDX1P47902 AL139100.1-201ENST00000408001 498 ntBASIC5.59□□□□□ -1.51
CDX1P47902 RN7SKP85-201ENST00000411349 318 ntBASIC5.59□□□□□ -1.51
CDX1P47902 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AL157698.1-201ENST00000415190 1011 ntBASIC5.59□□□□□ -1.51
CDX1P47902 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 MICG-208ENST00000416822 132 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AC009303.1-201ENST00000426307 352 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AC104698.1-201ENST00000435671 276 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AL592114.2-201ENST00000440142 532 ntBASIC5.59□□□□□ -1.51
CDX1P47902 RPS19P6-201ENST00000441327 433 ntBASIC5.59□□□□□ -1.51
CDX1P47902 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 MTND6P5-201ENST00000448266 512 ntBASIC5.59□□□□□ -1.51
CDX1P47902 MGAT2P1-201ENST00000449718 797 ntBASIC5.59□□□□□ -1.51
CDX1P47902 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 PSPC1P2-201ENST00000455130 225 ntBASIC5.59□□□□□ -1.51
CDX1P47902 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CDX1P47902 SNRPCP3-201ENST00000474888 476 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC026826.1-201ENST00000493002 361 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.59□□□□□ -1.51
CDX1P47902 AP001803.1-201ENST00000525668 147 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDX1P47902 AP000619.2-201ENST00000546014 969 ntBASIC5.59□□□□□ -1.51
CDX1P47902 ULK4P1-202ENST00000565174 503 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AC015801.1-201ENST00000585651 153 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AC122710.3-201ENST00000606566 541 ntBASIC5.59□□□□□ -1.51
CDX1P47902 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AC117490.2-201ENST00000610042 594 ntBASIC5.59□□□□□ -1.51
CDX1P47902 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 MIR6883-201ENST00000614952 78 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC117503.3-201ENST00000623811 601 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AP003108.4-201ENST00000623917 878 ntBASIC5.59□□□□□ -1.51
CDX1P47902 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.59□□□□□ -1.51
CDX1P47902 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.59□□□□□ -1.51
CDX1P47902 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms