Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Usp4P35123 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp4P35123 Mir294-201ENSMUST00000104710 84 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp4P35123 Gm13268-201ENSMUST00000117485 433 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm11384-201ENSMUST00000121376 303 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm6265-201ENSMUST00000149263 231 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm23258-201ENSMUST00000158319 106 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm23112-201ENSMUST00000158606 125 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp4P35123 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm25748-201ENSMUST00000175487 70 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm25817-201ENSMUST00000177758 121 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm24766-201ENSMUST00000179182 121 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm27796-201ENSMUST00000183863 261 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Mir7658-201ENSMUST00000184043 57 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.99□□□□□ -1.77
Usp4P35123 Gm42570-201ENSMUST00000195937 292 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm43284-201ENSMUST00000200103 253 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm35931-201ENSMUST00000203931 448 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.99□□□□□ -1.77
Usp4P35123 Gm29774-201ENSMUST00000219270 436 ntBASIC3.99□□□□□ -1.77
Usp4P35123 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.99□□□□□ -1.77
Usp4P35123 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.99□□□□□ -1.77
Usp4P35123 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.99□□□□□ -1.77
Usp4P35123 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Gm23845-201ENSMUST00000083834 152 ntBASIC3.99□□□□□ -1.77
Usp4P35123 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp4P35123 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp4P35123 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.98□□□□□ -1.77
Usp4P35123 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm22496-201ENSMUST00000104493 88 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm14299-201ENSMUST00000117586 397 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm12647-201ENSMUST00000118977 265 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm11456-201ENSMUST00000121070 256 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm25967-201ENSMUST00000157168 147 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm24552-201ENSMUST00000158646 103 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm6374-201ENSMUST00000159051 788 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Gm23152-201ENSMUST00000175322 116 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm25175-201ENSMUST00000178712 79 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Mir6335-201ENSMUST00000184081 98 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm27445-201ENSMUST00000184484 72 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm27477-201ENSMUST00000184649 143 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm27747-201ENSMUST00000184707 85 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm29574-201ENSMUST00000186226 696 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm28828-201ENSMUST00000186601 696 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Usp4P35123 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm28159-201ENSMUST00000190296 696 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm7871-201ENSMUST00000195346 618 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm43424-201ENSMUST00000200484 253 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm45150-201ENSMUST00000206051 467 ntBASIC3.98□□□□□ -1.77
Usp4P35123 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.98□□□□□ -1.77
Usp4P35123 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm46997-201ENSMUST00000222108 217 ntBASIC3.98□□□□□ -1.77
Usp4P35123 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.98□□□□□ -1.77
Usp4P35123 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Usp4P35123 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Usp4P35123 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Usp4P35123 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Usp4P35123 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Usp4P35123 Gm12815-201ENSMUST00000121737 135 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm15213-201ENSMUST00000122098 216 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm12956-201ENSMUST00000122184 414 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm26476-201ENSMUST00000122618 313 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.97□□□□□ -1.77
Usp4P35123 Gm22814-201ENSMUST00000157452 104 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm24505-201ENSMUST00000157682 126 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm22611-201ENSMUST00000158288 150 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm24501-201ENSMUST00000158452 62 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm17065-201ENSMUST00000165245 239 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Mir1251-201ENSMUST00000175486 84 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm23864-201ENSMUST00000177607 107 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm23816-201ENSMUST00000179617 132 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Mir7047-201ENSMUST00000184595 64 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.97□□□□□ -1.77
Usp4P35123 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm45678-201ENSMUST00000210509 295 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.97□□□□□ -1.77
Usp4P35123 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.97□□□□□ -1.77
Usp4P35123 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.97□□□□□ -1.77
Usp4P35123 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.97□□□□□ -1.77
Usp4P35123 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Usp4P35123 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Usp4P35123 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Usp4P35123 Gm24338-201ENSMUST00000104205 127 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms