Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC164561.1-201ENSMUST00000220414 115 ntBASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Gm25930-201ENSMUST00000082785 107 ntBASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Mir30b-201ENSMUST00000083542 96 ntBASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Gm25896-201ENSMUST00000083713 136 ntBASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim39Q9ESN2 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Trim39Q9ESN2 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Trim39Q9ESN2 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.73
Trim39Q9ESN2 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
Trim39Q9ESN2 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Mir466p-201ENSMUST00000103925 89 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm25096-201ENSMUST00000104043 129 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm15745-201ENSMUST00000119807 115 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm22870-201ENSMUST00000157501 112 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm22637-201ENSMUST00000158144 283 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm26828-201ENSMUST00000180640 172 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm29097-201ENSMUST00000190273 422 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm43309-201ENSMUST00000200837 458 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm44184-201ENSMUST00000204290 132 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm44030-201ENSMUST00000204865 432 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm23626-201ENSMUST00000082458 133 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Mir302d-201ENSMUST00000083513 66 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.27□□□□□ -1.73
Trim39Q9ESN2 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Mir294-201ENSMUST00000104710 84 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm14512-201ENSMUST00000117924 230 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm15905-201ENSMUST00000137042 298 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm23584-201ENSMUST00000157655 129 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm19503-201ENSMUST00000187109 241 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm29479-201ENSMUST00000190352 455 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Mir465d-201ENSMUST00000196314 58 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm17775-201ENSMUST00000198542 258 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.26□□□□□ -1.73
Trim39Q9ESN2 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm24124-201ENSMUST00000104103 132 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm12982-201ENSMUST00000117408 190 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm14782-201ENSMUST00000120151 195 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm11204-201ENSMUST00000122438 147 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm23466-201ENSMUST00000157133 106 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm22561-201ENSMUST00000157331 84 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm23641-201ENSMUST00000157857 101 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm23546-201ENSMUST00000158211 137 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm22767-201ENSMUST00000158365 165 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Mir669k-201ENSMUST00000177742 127 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm25673-201ENSMUST00000179957 127 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm37617-201ENSMUST00000194309 159 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm25813-201ENSMUST00000082748 191 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm24152-201ENSMUST00000082764 163 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm24950-201ENSMUST00000082768 191 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm25140-201ENSMUST00000083254 140 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm23971-201ENSMUST00000083317 191 ntBASIC4.25□□□□□ -1.73
Trim39Q9ESN2 Gm23849-201ENSMUST00000083833 191 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms