Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col17a1Q07563 Snora36b-201ENSMUST00000104383 132 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm14558-201ENSMUST00000117458 381 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm14593-201ENSMUST00000119948 294 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm15267-201ENSMUST00000120888 464 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm2768-201ENSMUST00000121062 250 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm15697-201ENSMUST00000121946 2902 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm6956-201ENSMUST00000134724 546 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Gm23581-201ENSMUST00000158531 63 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm10074-201ENSMUST00000174543 249 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5□□□□□ -1.61
Col17a1Q07563 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5□□□□□ -1.61
Col17a1Q07563 Gm25525-201ENSMUST00000177701 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm26178-201ENSMUST00000177706 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm26465-201ENSMUST00000178517 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm24317-201ENSMUST00000178536 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm25021-201ENSMUST00000179184 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm22995-201ENSMUST00000179670 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm24424-201ENSMUST00000179714 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm24389-201ENSMUST00000179962 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm25672-201ENSMUST00000180111 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm27385-201ENSMUST00000184747 104 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm29163-201ENSMUST00000188029 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm29475-201ENSMUST00000190767 312 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm43723-201ENSMUST00000196886 189 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col17a1Q07563 Gm45031-201ENSMUST00000206800 288 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm18696-201ENSMUST00000220103 274 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col17a1Q07563 Gm24144-201ENSMUST00000082632 111 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm23815-201ENSMUST00000083231 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm23520-201ENSMUST00000093736 107 ntBASIC5□□□□□ -1.61
Col17a1Q07563 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col17a1Q07563 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm23911-201ENSMUST00000104596 134 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm8244-201ENSMUST00000121254 264 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm3370-201ENSMUST00000171785 500 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm27660-201ENSMUST00000184028 208 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm10343-201ENSMUST00000096279 348 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Col17a1Q07563 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.99□□□□□ -1.61
Col17a1Q07563 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col17a1Q07563 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col17a1Q07563 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm11221-201ENSMUST00000117230 597 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm14736-201ENSMUST00000121470 336 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm25670-201ENSMUST00000178423 107 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm26239-201ENSMUST00000178842 107 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm24267-201ENSMUST00000179841 107 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm25528-201ENSMUST00000180264 132 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm43651-201ENSMUST00000199796 439 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm45452-201ENSMUST00000210905 177 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm24292-201ENSMUST00000082888 107 ntBASIC4.98□□□□□ -1.61
Col17a1Q07563 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col17a1Q07563 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col17a1Q07563 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Col17a1Q07563 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col17a1Q07563 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm13082-201ENSMUST00000118877 561 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm13406-201ENSMUST00000121991 256 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm14364-201ENSMUST00000129209 267 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm16327-201ENSMUST00000137146 228 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm22563-201ENSMUST00000157333 269 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm23670-201ENSMUST00000157469 119 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm7925-201ENSMUST00000166690 401 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col17a1Q07563 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm18213-201ENSMUST00000207850 178 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 n-R5s176-201ENSMUST00000082683 109 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm22265-201ENSMUST00000082947 116 ntBASIC4.97□□□□□ -1.61
Col17a1Q07563 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col17a1Q07563 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col17a1Q07563 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col17a1Q07563 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Col17a1Q07563 Gm24640-201ENSMUST00000116949 126 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms