Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scaf1Q5U4C3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scaf1Q5U4C3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scaf1Q5U4C3 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm12252-201ENSMUST00000119517 219 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm14881-201ENSMUST00000120366 372 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm15212-201ENSMUST00000122403 466 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm22453-201ENSMUST00000122801 318 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm5963-201ENSMUST00000143451 236 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm23638-201ENSMUST00000175073 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm23158-201ENSMUST00000175076 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm22907-201ENSMUST00000175198 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm22625-201ENSMUST00000175382 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm22875-201ENSMUST00000175449 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm25197-201ENSMUST00000175516 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Mir5134-201ENSMUST00000175529 78 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm27857-201ENSMUST00000176930 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm26268-201ENSMUST00000177685 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm23681-201ENSMUST00000178821 126 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm43304-201ENSMUST00000196803 326 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm45434-201ENSMUST00000210550 293 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Gm17779-201ENSMUST00000213395 394 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Scaf1Q5U4C3 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm15613-201ENSMUST00000118396 326 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm15936-201ENSMUST00000118706 460 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm13868-201ENSMUST00000122411 294 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm25908-201ENSMUST00000157624 98 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Mir6537-201ENSMUST00000184150 110 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm36946-201ENSMUST00000192706 435 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm37763-201ENSMUST00000193445 120 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm26457-201ENSMUST00000082678 78 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.87□□□□□ -1.47
Scaf1Q5U4C3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm24172-201ENSMUST00000104127 117 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm13155-201ENSMUST00000119277 646 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm8178-201ENSMUST00000121570 646 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm14562-201ENSMUST00000129885 543 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm26585-201ENSMUST00000180890 630 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Gm22247-201ENSMUST00000082476 131 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scaf1Q5U4C3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm7853-201ENSMUST00000100708 478 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm24788-201ENSMUST00000104283 156 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm13329-201ENSMUST00000117063 265 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm15215-201ENSMUST00000117773 489 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm12771-201ENSMUST00000120246 135 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm13424-201ENSMUST00000122301 354 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm23702-201ENSMUST00000158840 130 ntBASIC5.85□□□□□ -1.47
Scaf1Q5U4C3 Gm26362-201ENSMUST00000158865 315 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms