Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm13725-201ENSMUST00000122139 207 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Trav20-201ENSMUST00000142754 347 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm26085-201ENSMUST00000157900 116 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm24676-201ENSMUST00000158758 75 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm24100-201ENSMUST00000178592 79 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm24137-201ENSMUST00000180055 79 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm22391-201ENSMUST00000180356 79 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Mir6975-201ENSMUST00000184879 61 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm19096-201ENSMUST00000209705 766 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm19790-201ENSMUST00000214414 251 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccbe1Q3MI99 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
Ccbe1Q3MI99 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm23014-201ENSMUST00000104144 130 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm14622-201ENSMUST00000117117 468 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm12509-201ENSMUST00000118033 609 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm24689-201ENSMUST00000157760 104 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm25920-201ENSMUST00000158307 99 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm24518-201ENSMUST00000180275 94 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm27921-201ENSMUST00000183968 108 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm19498-201ENSMUST00000191128 331 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm38044-201ENSMUST00000192964 487 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm18213-201ENSMUST00000207850 178 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm45704-201ENSMUST00000212582 403 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Gm26164-201ENSMUST00000083793 104 ntBASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccbe1Q3MI99 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm24605-201ENSMUST00000104772 96 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm14823-201ENSMUST00000117698 238 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm14570-201ENSMUST00000119444 391 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm11398-201ENSMUST00000120330 320 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm12486-201ENSMUST00000120887 541 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm15223-201ENSMUST00000120989 826 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm14287-201ENSMUST00000121060 117 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm24739-201ENSMUST00000158855 292 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm3027-201ENSMUST00000167579 451 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm3104-201ENSMUST00000171004 473 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm26828-201ENSMUST00000180640 172 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm29014-201ENSMUST00000191422 326 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm37338-201ENSMUST00000191986 127 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm19243-201ENSMUST00000198592 269 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm8745-201ENSMUST00000207846 782 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm8940-201ENSMUST00000212585 219 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gm22974-201ENSMUST00000083301 103 ntBASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccbe1Q3MI99 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm26019-201ENSMUST00000104407 119 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm25560-201ENSMUST00000104606 176 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm13155-201ENSMUST00000119277 646 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm11384-201ENSMUST00000121376 303 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm8178-201ENSMUST00000121570 646 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm12785-201ENSMUST00000122052 172 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm22026-201ENSMUST00000122735 281 ntBASIC3.75□□□□□ -1.81
Ccbe1Q3MI99 Gm13901-201ENSMUST00000137252 468 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms