Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Mir687-201ENSMUST00000102166 89 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm23175-201ENSMUST00000104371 132 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm22496-201ENSMUST00000104493 88 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm11718-201ENSMUST00000119942 537 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm13903-201ENSMUST00000120945 193 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm14841-201ENSMUST00000121067 758 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm25486-201ENSMUST00000158726 63 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm17109-201ENSMUST00000163985 358 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm25175-201ENSMUST00000178712 79 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm27695-201ENSMUST00000184301 91 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm29665-201ENSMUST00000191457 528 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm34073-201ENSMUST00000195736 212 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm43284-201ENSMUST00000200103 253 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm43415-201ENSMUST00000201934 750 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm45313-201ENSMUST00000210584 178 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Snora23-201ENSMUST00000082517 184 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Mir215-201ENSMUST00000083628 112 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Rny1-201ENSMUST00000083767 112 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col13a1Q9R1N9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col13a1Q9R1N9 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Col13a1Q9R1N9 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm13439-201ENSMUST00000117541 409 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm13550-201ENSMUST00000118185 525 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm13880-201ENSMUST00000118421 474 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm13873-201ENSMUST00000119208 427 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm14586-201ENSMUST00000119571 408 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm11693-201ENSMUST00000119625 565 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm11785-201ENSMUST00000120165 601 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm26347-201ENSMUST00000157526 131 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm26373-201ENSMUST00000157833 103 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm27579-201ENSMUST00000158113 63 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm25643-201ENSMUST00000158874 103 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Mir6345-201ENSMUST00000184286 128 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm29428-201ENSMUST00000190086 409 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm28314-201ENSMUST00000191276 345 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm7041-201ENSMUST00000201227 524 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm19177-201ENSMUST00000204520 613 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm44779-201ENSMUST00000206937 708 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm5358-201ENSMUST00000212814 353 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm10222-201ENSMUST00000088336 294 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm25821-201ENSMUST00000093657 133 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.65□□□□□ -1.83
Col13a1Q9R1N9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm12335-201ENSMUST00000119738 327 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm27926-201ENSMUST00000157180 66 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm24858-201ENSMUST00000158058 323 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm23704-201ENSMUST00000158844 340 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm5258-201ENSMUST00000165437 327 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Spin2g-201ENSMUST00000178425 687 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm16378-201ENSMUST00000179168 342 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Mir195b-201ENSMUST00000184814 97 ntBASIC3.64□□□□□ -1.83
Col13a1Q9R1N9 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms