Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 FAM30C-201ENST00000561158 410 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX3Q99909 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX3Q99909 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX3Q99909 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX3Q99909 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 AC137695.1-201ENST00000604126 489 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC027271.1-201ENST00000610270 610 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC007347.2-201ENST00000623044 180 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AC093909.6-201ENST00000624757 775 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 AP000550.3-201ENST00000637734 379 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 KYNUP2-201ENST00000582280 1329 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 AL929601.4-201ENST00000613011 1341 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 EEF1A1P26-201ENST00000458319 1363 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 MFSD8-256ENST00000641949 1640 ntBASIC5.87□□□□□ -1.47
SSX3Q99909 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX3Q99909 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX3Q99909 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSX3Q99909 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX3Q99909 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SSX3Q99909 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX3Q99909 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SSX3Q99909 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SSX3Q99909 AC006116.1-201ENST00000587908 2171 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 GTF2IP4-201ENST00000453092 2054 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC027279.4-201ENST00000624371 2072 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 TMCC1P1-201ENST00000518897 1980 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SSX3Q99909 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 SYT14P1-202ENST00000600441 1448 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 MTHFD2P5-201ENST00000320415 844 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX3Q99909 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX3Q99909 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX3Q99909 PPIAP22-201ENST00000358455 498 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX3Q99909 SNORA70.8-201ENST00000384231 136 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 MIR199B-201ENST00000384849 110 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 RNA5SP35-201ENST00000391257 129 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AL627308.2-201ENST00000420014 432 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 RPL7AP14-201ENST00000424041 802 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX3Q99909 OR52S1P-201ENST00000427016 937 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 OR6C71P-201ENST00000432580 913 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 AL354893.1-201ENST00000433735 348 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 ANXA2P2-201ENST00000435128 1020 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX3Q99909 RPL14P5-201ENST00000436474 730 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.86□□□□□ -1.47
SSX3Q99909 RPL29P7-201ENST00000440227 457 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 DNAJC19P5-201ENST00000443295 316 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 RPS7P4-201ENST00000444127 582 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX3Q99909 RN7SL180P-201ENST00000466769 294 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 RPL7AP30-201ENST00000482859 796 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC025271.1-201ENST00000485045 429 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 EIF4E2P2-201ENST00000492033 736 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 RPL5P11-201ENST00000498068 893 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC105391.1-201ENST00000503155 1045 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 RPS23-208ENST00000512493 443 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 IGLV1-62-201ENST00000518003 441 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 OR7E161P-201ENST00000533722 967 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX3Q99909 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX3Q99909 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC5.86□□□□□ -1.47
SSX3Q99909 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX3Q99909 RPSAP66-201ENST00000592196 606 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC125494.2-201ENST00000602431 657 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AL512430.4-201ENST00000603085 613 ntBASIC5.86□□□□□ -1.47
SSX3Q99909 AC113361.1-201ENST00000606683 543 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms