Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim28Q62318 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim28Q62318 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim28Q62318 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
Trim28Q62318 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim28Q62318 Gm13761-201ENSMUST00000117238 807 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm15215-201ENSMUST00000117773 489 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim28Q62318 Gm22722-201ENSMUST00000157467 132 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm27579-201ENSMUST00000158113 63 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm22833-201ENSMUST00000158292 132 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm24306-201ENSMUST00000180229 79 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm6501-201ENSMUST00000187178 916 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm19418-201ENSMUST00000197436 580 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim28Q62318 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Gm24316-201ENSMUST00000083041 107 ntBASIC4.41□□□□□ -1.7
Trim28Q62318 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim28Q62318 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.4□□□□□ -1.7
Trim28Q62318 Gm22834-201ENSMUST00000102021 79 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm14578-201ENSMUST00000122166 391 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm22956-201ENSMUST00000122520 80 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim28Q62318 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim28Q62318 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim28Q62318 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim28Q62318 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim28Q62318 Gm25365-201ENSMUST00000158852 121 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm3851-201ENSMUST00000168653 318 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm22716-201ENSMUST00000177596 107 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm25412-201ENSMUST00000180258 107 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm2719-201ENSMUST00000191929 444 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Gm44521-201ENSMUST00000206469 217 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim28Q62318 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.4□□□□□ -1.71
Trim28Q62318 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim28Q62318 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim28Q62318 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim28Q62318 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim28Q62318 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trim28Q62318 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Trim28Q62318 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim28Q62318 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim28Q62318 Gm25213-201ENSMUST00000102388 113 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim28Q62318 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim28Q62318 Gm13167-201ENSMUST00000118554 578 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm6762-201ENSMUST00000121769 289 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim28Q62318 Gm6486-201ENSMUST00000166202 434 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm28283-201ENSMUST00000185509 178 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm29104-201ENSMUST00000186304 222 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm28654-201ENSMUST00000189801 379 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm18551-201ENSMUST00000195594 642 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm44349-201ENSMUST00000197048 123 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim28Q62318 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.39□□□□□ -1.71
Trim28Q62318 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim28Q62318 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim28Q62318 Gm23447-201ENSMUST00000082798 163 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.39□□□□□ -1.71
Trim28Q62318 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
Trim28Q62318 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim28Q62318 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim28Q62318 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim28Q62318 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim28Q62318 Gm13687-201ENSMUST00000119857 282 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm2005-201ENSMUST00000120759 542 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim28Q62318 Gm8161-201ENSMUST00000168739 481 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Mir5127-201ENSMUST00000175295 71 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm4761-201ENSMUST00000178086 582 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm14527-201ENSMUST00000179300 639 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm32340-201ENSMUST00000192883 259 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm9379-201ENSMUST00000196790 646 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm44376-201ENSMUST00000197570 128 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm43899-201ENSMUST00000203675 246 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm45616-201ENSMUST00000211711 319 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm45439-201ENSMUST00000211723 359 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim28Q62318 Gm10237-201ENSMUST00000078393 273 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm26449-201ENSMUST00000082452 104 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Gm22229-201ENSMUST00000082987 108 ntBASIC4.38□□□□□ -1.71
Trim28Q62318 Snora31-201ENSMUST00000083213 130 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms