Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox1P53783 Gm15148-201ENSMUST00000117602 156 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm12412-201ENSMUST00000121867 328 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm14846-201ENSMUST00000121868 216 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm24371-201ENSMUST00000122662 267 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm24627-201ENSMUST00000122764 138 ntBASIC4.5□□□□□ -1.69
Sox1P53783 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.5□□□□□ -1.69
Sox1P53783 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.5□□□□□ -1.69
Sox1P53783 Gm23666-201ENSMUST00000158053 116 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm17187-201ENSMUST00000164622 410 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sox1P53783 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.5□□□□□ -1.69
Sox1P53783 Gm27545-201ENSMUST00000184755 202 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm29429-201ENSMUST00000187071 121 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm37763-201ENSMUST00000193445 120 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm37030-201ENSMUST00000194254 295 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Mir3535-201ENSMUST00000197651 147 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm43529-201ENSMUST00000199178 412 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Gm45380-201ENSMUST00000210465 315 ntBASIC4.5□□□□□ -1.69
Sox1P53783 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox1P53783 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.5□□□□□ -1.69
Sox1P53783 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sox1P53783 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sox1P53783 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox1P53783 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Sox1P53783 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox1P53783 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Sox1P53783 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.49□□□□□ -1.69
Sox1P53783 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox1P53783 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox1P53783 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox1P53783 Gm24423-201ENSMUST00000101982 106 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Sox1P53783 Gm14299-201ENSMUST00000117586 397 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm26479-201ENSMUST00000122620 106 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox1P53783 Gm25390-201ENSMUST00000157341 103 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm26186-201ENSMUST00000157689 125 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm23084-201ENSMUST00000157850 114 ntBASIC4.49□□□□□ -1.69
Sox1P53783 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox1P53783 Gm10075-201ENSMUST00000162030 545 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm3370-201ENSMUST00000171785 500 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm37601-201ENSMUST00000194922 394 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
Sox1P53783 Gm32536-201ENSMUST00000205209 445 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.49□□□□□ -1.69
Sox1P53783 Gm45273-201ENSMUST00000211559 281 ntBASIC4.49□□□□□ -1.69
Sox1P53783 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.49□□□□□ -1.69
Sox1P53783 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
Sox1P53783 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox1P53783 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox1P53783 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox1P53783 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Sox1P53783 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Sox1P53783 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.49□□□□□ -1.69
Sox1P53783 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.49□□□□□ -1.69
Sox1P53783 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Sox1P53783 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox1P53783 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox1P53783 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox1P53783 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox1P53783 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox1P53783 Gm25272-201ENSMUST00000104293 128 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm26036-201ENSMUST00000158149 144 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm22381-201ENSMUST00000158186 107 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.48□□□□□ -1.69
Sox1P53783 Mir5098-201ENSMUST00000175320 82 ntBASIC4.48□□□□□ -1.69
Sox1P53783 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sox1P53783 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm28148-201ENSMUST00000186924 697 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm43250-201ENSMUST00000196536 273 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sox1P53783 Gm18011-201ENSMUST00000203717 565 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.48□□□□□ -1.69
Sox1P53783 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm23443-201ENSMUST00000082916 128 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm24611-201ENSMUST00000083272 107 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox1P53783 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox1P53783 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.48□□□□□ -1.69
Sox1P53783 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox1P53783 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Sox1P53783 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox1P53783 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.48□□□□□ -1.69
Sox1P53783 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sox1P53783 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox1P53783 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox1P53783 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sox1P53783 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sox1P53783 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sox1P53783 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms