Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm25684-201ENSMUST00000083941 107 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col9a1Q05722 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm42870-201ENSMUST00000199355 3470 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.14□□□□□ -1.59
Col9a1Q05722 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.14□□□□□ -1.59
Col9a1Q05722 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col9a1Q05722 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Snord90-201ENSMUST00000104568 111 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm15613-201ENSMUST00000118396 326 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Mir1942-201ENSMUST00000157274 63 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm26049-201ENSMUST00000157313 108 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm22816-201ENSMUST00000157450 117 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm23872-201ENSMUST00000175432 77 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm22569-201ENSMUST00000175545 124 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm37545-201ENSMUST00000186512 148 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm18618-201ENSMUST00000222211 473 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm22620-201ENSMUST00000082700 133 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm22970-201ENSMUST00000083304 186 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm26166-201ENSMUST00000083788 107 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Col9a1Q05722 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.13□□□□□ -1.59
Col9a1Q05722 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col9a1Q05722 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 n-R5s216-201ENSMUST00000122755 112 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 Mir1945-201ENSMUST00000157919 78 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 Gm26170-201ENSMUST00000158419 148 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 Gm32536-201ENSMUST00000205209 445 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 AC069074.2-201ENSMUST00000217819 428 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 CT033781.2-201ENSMUST00000221113 153 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Col9a1Q05722 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.12□□□□□ -1.59
Col9a1Q05722 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col9a1Q05722 Naip3-201ENSMUST00000118082 4208 ntBASIC5.12□□□□□ -1.59
Col9a1Q05722 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25753-201ENSMUST00000116792 121 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22051-201ENSMUST00000117002 127 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm15012-201ENSMUST00000119176 106 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm14067-201ENSMUST00000119340 314 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25386-201ENSMUST00000157814 288 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25098-201ENSMUST00000177580 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm23356-201ENSMUST00000177610 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24027-201ENSMUST00000177611 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22511-201ENSMUST00000177628 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22630-201ENSMUST00000177781 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm23560-201ENSMUST00000177782 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25462-201ENSMUST00000177833 79 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms