Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC096992.1-201ENST00000459808 709 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 RPL32P14-201ENST00000463196 378 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 PGBD4P1-201ENST00000473644 407 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 OR2A3P-201ENST00000493774 953 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC095057.1-201ENST00000507583 168 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC111000.6-201ENST00000514471 709 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC087894.1-201ENST00000538359 518 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC135279.1-201ENST00000543493 504 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC090666.1-201ENST00000578241 445 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.19□□□□□ -1.26
COL6A2P12110 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 OR5AH1P-201ENST00000595968 283 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC022022.2-201ENST00000602989 360 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 DUXAP3-201ENST00000603616 594 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC091544.5-201ENST00000620192 3815 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AL669942.2-201ENST00000620352 697 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AP000842.4-201ENST00000638781 748 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.19□□□□□ -1.26
COL6A2P12110 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL6A2P12110 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.19□□□□□ -1.26
COL6A2P12110 AC006116.1-201ENST00000587908 2171 ntBASIC7.19□□□□□ -1.26
COL6A2P12110 AC061975.5-201ENST00000584928 1441 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL6A2P12110 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 SOCS5P5-201ENST00000402732 1586 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 MIR614-201ENST00000385082 90 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AL590762.1-201ENST00000391782 432 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 MTCO2P31-201ENST00000402702 684 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 CRIP1P3-201ENST00000416794 220 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 HYALP1-201ENST00000417674 1279 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 MTND1P10-201ENST00000426108 832 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 RNF19BPX-201ENST00000426224 625 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL6A2P12110 MTCO1P51-201ENST00000427672 1060 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC7.18□□□□□ -1.26
COL6A2P12110 RPL7P33-201ENST00000444159 742 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AL096829.2-201ENST00000446582 742 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC093166.2-201ENST00000455969 1017 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 RN7SL205P-201ENST00000490174 284 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 OR9N1P-202ENST00000494289 481 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC020699.1-201ENST00000505161 445 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC112184.1-201ENST00000505179 312 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL6A2P12110 AC026700.1-201ENST00000512074 544 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL6A2P12110 AC092133.1-201ENST00000565828 719 ntBASIC7.18□□□□□ -1.26
COL6A2P12110 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms