Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Gm13401-201ENSMUST00000117074 291 ntBASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Gm15375-201ENSMUST00000119510 849 ntBASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
H2afb3S4R1G7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Dio3-201ENSMUST00000097228 1449 ntBASIC15.44■□□□□ 0.06
H2afb3S4R1G7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2afb3S4R1G7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.43■□□□□ 0.06
H2afb3S4R1G7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Gm12896-201ENSMUST00000118430 226 ntBASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
H2afb3S4R1G7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
H2afb3S4R1G7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms