Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Mir2861-201ENSMUST00000175539 82 ntBASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh5Q9QUM7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Gm38116-201ENSMUST00000193873 1533 ntBASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh5Q9QUM7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Gm17872-201ENSMUST00000222550 532 ntBASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh5Q9QUM7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Gm15626-201ENSMUST00000117478 868 ntBASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Gm14363-201ENSMUST00000122304 409 ntBASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh5Q9QUM7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Gm12849-201ENSMUST00000120013 739 ntBASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
Msh5Q9QUM7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms