Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Gm16061-201ENSMUST00000122167 857 ntBASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx5Q9JL61 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Mir5130-201ENSMUST00000175160 84 ntBASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx5Q9JL61 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rfx5Q9JL61 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx5Q9JL61 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Gm18958-201ENSMUST00000174258 762 ntBASIC18.09■□□□□ 0.49
Rfx5Q9JL61 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfx5Q9JL61 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx5Q9JL61 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Gm10566-201ENSMUST00000086739 996 ntBASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Rfx5Q9JL61 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Gm13836-201ENSMUST00000121159 501 ntBASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Gm13474-201ENSMUST00000122466 815 ntBASIC18.07■□□□□ 0.48
Rfx5Q9JL61 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx5Q9JL61 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms