Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup50Q9JIH2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Gm17661-201ENSMUST00000170317 270 ntBASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup50Q9JIH2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup50Q9JIH2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup50Q9JIH2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Nup50Q9JIH2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup50Q9JIH2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nup50Q9JIH2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms