Protein–RNA interactions for Protein: Q9ESK9

Rb1cc1, RB1-inducible coiled-coil protein 1, mousemouse

Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1cc1Q9ESK9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rb1cc1Q9ESK9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rb1cc1Q9ESK9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC31.31■■■□□ 2.6
Rb1cc1Q9ESK9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rb1cc1Q9ESK9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Gm12350-201ENSMUST00000121208 462 ntBASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Gm13830-205ENSMUST00000201195 1155 ntBASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC31.3■■■□□ 2.6
Rb1cc1Q9ESK9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Zfp264-201ENSMUST00000208656 1563 ntBASIC31.29■■■□□ 2.6
Rb1cc1Q9ESK9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rb1cc1Q9ESK9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rb1cc1Q9ESK9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rb1cc1Q9ESK9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rb1cc1Q9ESK9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rb1cc1Q9ESK9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC31.27■■■□□ 2.6
Rb1cc1Q9ESK9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rb1cc1Q9ESK9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 Gm7862-201ENSMUST00000121461 292 ntBASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 Gm10060-201ENSMUST00000212002 111 ntBASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Rb1cc1Q9ESK9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 AC160338.1-201ENSMUST00000214232 705 ntBASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rb1cc1Q9ESK9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Gm1401-201ENSMUST00000122048 772 ntBASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rb1cc1Q9ESK9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rb1cc1Q9ESK9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rb1cc1Q9ESK9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Rb1cc1Q9ESK9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rb1cc1Q9ESK9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rb1cc1Q9ESK9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Rb1cc1Q9ESK9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rb1cc1Q9ESK9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Rb1cc1Q9ESK9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Rb1cc1Q9ESK9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Rb1cc1Q9ESK9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms