Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ush1cQ9ES64 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Gm18671-201ENSMUST00000214826 683 ntBASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ush1cQ9ES64 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Gm10849-201ENSMUST00000100397 618 ntBASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Gm42778-201ENSMUST00000199644 553 ntBASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ush1cQ9ES64 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Gm7291-201ENSMUST00000199147 382 ntBASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Gm10033-202ENSMUST00000211874 928 ntBASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Idnk-204ENSMUST00000226010 1898 ntBASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ush1cQ9ES64 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ush1cQ9ES64 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ush1cQ9ES64 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.64■□□□□ 0.74
Ush1cQ9ES64 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ush1cQ9ES64 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ush1cQ9ES64 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ush1cQ9ES64 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Gm27405-201ENSMUST00000184201 112 ntBASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Gm9988-201ENSMUST00000069786 435 ntBASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ush1cQ9ES64 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ush1cQ9ES64 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms