Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
3830403N18RikQ9D6C3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
3830403N18RikQ9D6C3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
3830403N18RikQ9D6C3 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
3830403N18RikQ9D6C3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
3830403N18RikQ9D6C3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
3830403N18RikQ9D6C3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
3830403N18RikQ9D6C3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
3830403N18RikQ9D6C3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms