Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Gm29791-202ENSMUST00000207888 369 ntBASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
Chaf1bQ9D0N7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chaf1bQ9D0N7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chaf1bQ9D0N7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chaf1bQ9D0N7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chaf1bQ9D0N7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chaf1bQ9D0N7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chaf1bQ9D0N7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Gm10493-201ENSMUST00000097270 612 ntBASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chaf1bQ9D0N7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms