Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Gm13234-201ENSMUST00000120010 747 ntBASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1eQ9CZQ6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Gm12821-201ENSMUST00000120022 600 ntBASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Gm43017-201ENSMUST00000198296 752 ntBASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1eQ9CZQ6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.09■□□□□ 0.01
Raet1eQ9CZQ6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1eQ9CZQ6 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.08■□□□□ 0.01
Raet1eQ9CZQ6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1eQ9CZQ6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1eQ9CZQ6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1eQ9CZQ6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.08■□□□□ 0.01
Raet1eQ9CZQ6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1eQ9CZQ6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.08■□□□□ 0
Raet1eQ9CZQ6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1eQ9CZQ6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms